Generates a small simulated gene reference table for use in examples and
tests. Not intended for real analyses — use download_gene_ref
for a complete reference.
Usage
toy_gene_ref(species = c("human", "mouse"), n = 20L)Value
A data.frame with columns symbol, ensembl_id,
entrez_id, gene_type, species, ensembl_version,
and download_date.
Examples
toy_gene_ref()
#> ensembl_id symbol entrez_id gene_type
#> 1 ENSG00000199396 RNA5S5 124905431 rRNA
#> 2 ENSG00000295528 <NA> NA lncRNA
#> 3 ENSG00000301748 <NA> NA lncRNA
#> 4 ENSG00000253260 <NA> NA lncRNA
#> 5 ENSG00000258537 FRMD6-AS2 100874185 lncRNA
#> 6 ENSG00000008196 TFAP2B 7021 protein_coding
#> 7 ENSG00000202521 RNA5S7 124905438 rRNA
#> 8 ENSG00000285726 <NA> NA lncRNA
#> 9 ENSG00000284501 MGAT4B 11282 protein_coding
#> 10 ENSG00000199270 RNA5S12 124905842 rRNA
#> 11 ENSG00000294467 <NA> NA lncRNA
#> 12 ENSG00000293097 <NA> NA lncRNA
#> 13 ENSG00000172845 SP3 6670 protein_coding
#> 14 ENSG00000270149 <NA> NA protein_coding
#> 15 ENSG00000277660 <NA> 124906683 snRNA
#> 16 ENSG00000292419 <NA> NA processed_pseudogene
#> 17 ENSG00000227671 ZNF731P NA transcribed_unprocessed_pseudogene
#> 18 ENSG00000278499 NPAP1L NA unprocessed_pseudogene
#> 19 ENSG00000179958 DCTPP1 79077 protein_coding
#> 20 ENSG00000260659 <NA> NA lncRNA
#> species ensembl_version download_date
#> 1 human 113 2025-04-23
#> 2 human 113 2025-04-23
#> 3 human 113 2025-04-23
#> 4 human 113 2025-04-23
#> 5 human 113 2025-04-23
#> 6 human 113 2025-04-23
#> 7 human 113 2025-04-23
#> 8 human 113 2025-04-23
#> 9 human 113 2025-04-23
#> 10 human 113 2025-04-23
#> 11 human 113 2025-04-23
#> 12 human 113 2025-04-23
#> 13 human 113 2025-04-23
#> 14 human 113 2025-04-23
#> 15 human 113 2025-04-23
#> 16 human 113 2025-04-23
#> 17 human 113 2025-04-23
#> 18 human 113 2025-04-23
#> 19 human 113 2025-04-23
#> 20 human 113 2025-04-23
toy_gene_ref("mouse", n = 10)
#> ensembl_id symbol entrez_id
#> 1 ENSMUSG00000123309 <NA> NA
#> 2 ENSMUSG00000108739 Gm45096 NA
#> 3 ENSMUSG00000078513 Pramel22 277668
#> 4 ENSMUSG00000127289 <NA> NA
#> 5 ENSMUSG00000112032 Gm48036 NA
#> 6 ENSMUSG00000083239 Mup-ps1 NA
#> 7 ENSMUSG00000088811 Gm22381 115487860
#> 8 ENSMUSG00000027942 4933434E20Rik 99650
#> 9 ENSMUSG00000109888 Gm45600 NA
#> 10 ENSMUSG00000126842 <NA> NA
#> gene_type species ensembl_version download_date
#> 1 lncRNA mouse 113 2025-04-23
#> 2 lncRNA mouse 113 2025-04-23
#> 3 protein_coding mouse 113 2025-04-23
#> 4 lncRNA mouse 113 2025-04-23
#> 5 lncRNA mouse 113 2025-04-23
#> 6 transcribed_unprocessed_pseudogene mouse 113 2025-04-23
#> 7 snRNA mouse 113 2025-04-23
#> 8 protein_coding mouse 113 2025-04-23
#> 9 lncRNA mouse 113 2025-04-23
#> 10 lncRNA mouse 113 2025-04-23